Sources

DIPY

• DIPY website
• DIPY github repository
• DIPY contributing guide
• DIPY developer guide
• DIPY coding style guideline
• Tutorials
  • Reconstruct with Constant Solid Angle (Q-Ball)
  • Reconstruct with Generalized Q-Sampling Imaging
  • Introduction to Basic Tracking
  • K-fold cross-validation for model comparison

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Youtube videos

• DIPY Workshop 2021 Playlist
• Diffusion Weighted Imaging - Doctor Klioze
• Diffusion Tensor Imaging (DTI) - Doctor Klioze
• Diffusion Tensor Imaging (DTI) Explained! | Neuroscience Methods 101 - Psyched!
• DWI vs ADC MRI sequences: EXPLAINED - Radiology Tutorials
• Diffusion Weighted Imaging EXPLAINED (DWI Trace, ADC, B-Values) | MRI Physics Course Lecture 14 - MRI Physics EXPLAINED
• How to Read MRI Diffusion Imaging (DWI) like a Real Radiologist - MRI Physics EXPLAINED
• A tour of spherical harmonics-based local reconstruction techniques in DIPY - Part1 - Diffusion Imaging in Python - DIPY
• A tour of spherical harmonics-based local reconstruction techniques in DIPY - Part2 - Diffusion Imaging in Python - DIPY

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Scientific Papers

• Yeh, Wedeen, and Tseng (2010)
• Ben-Amitay, Jones, and Assaf (2012)

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Assistants

• Qwen3 Max
• Grok Code Fast 1

Other

• Nipreps book
• Prof. Esteban DIPY pull request
• Prof. Esteban DIPY fork
• Marimo website
• Quarto website
• Graphviz website
• Excalidraw website
• NDMG website

References

Ben-Amitay, Shani, Derek K. Jones, and Yaniv Assaf. 2012. “Motion Correction and Registration of High b-Value Diffusion Weighted Images.” Magnetic Resonance in Medicine 67 (6): 1694–1702. https://doi.org/10.1002/mrm.23186.

Yeh, Fang-Cheng, Van Jay Wedeen, and Wen-Yih Isaac Tseng. 2010. “Generalized \({q}\)-Sampling Imaging.” IEEE Transactions on Medical Imaging 29 (9): 1626–35. https://doi.org/10.1109/TMI.2010.2045126.